Outputs¶
Expected CSV output¶
CSV file name | Description |
---|---|
ATCG | Contains gene id, GC, GC1, GC2, GC3, GC12, AT, AT3 A3, T3, C3, G3, GRAVY, AROMO and gene length |
CA_RSCU | Each RSCU result for each codon in each genes |
CA_RSCUcodons | Correspondence analysis for the first 4 axes of each codon |
CA_RSCUgenes | Correspondence analysis for the first 4 axis of gene |
CAI | Gene id and CAI for each gene |
ENc | Gene id and ENc for each gene |
P2-index | Gene id and P2 index for each gene |
optimal codons | Putative optimal codons |